nsv4679071
- Organism: Homo sapiens
- Study:nstd189 (Perez-Palma et al. 2020)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:366,843
- Publication(s):Pérez-Palma et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1371 SVs from 84 studies. See in: genome view
Overlapping variant regions from other studies: 1371 SVs from 84 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4679071 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 125,832,646 | 126,199,488 |
| nsv4679071 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000007.13 | Chr7 | 125,472,700 | 125,839,542 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16211273 | deletion | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16211273 | Remapped | Perfect | NC_000007.14:g.(?_ 125832646)_(126199 488_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 125,832,646 | 126,199,488 |
| nssv16211273 | Submitted genomic | NC_000007.13:g.(?_ 125472700)_(125839 542_?)del | GRCh37.p13 | NC_000007.13 | Chr7 | 125,472,700 | 125,839,542 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) |
|---|---|
| nssv16211273 | <0.001 |