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dbVar

Database of genomic structural variation

nsv4681897

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:256,273

Description:NC_000023.11:g.(?_108440116)_(108696388_?)del AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 321 SVs from 41 studies. See in: genome view

Remapped(Score: Perfect):108,440,116-108,696,388

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4681897	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	108,440,116	108,696,388
nsv4681897	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	107,683,346	107,939,618

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID
nssv16213358	deletion	Multiple	Multiple	not provided	Pathogenic	ClinVar	RCV001031534.2, VCV000830937.2

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv16213358	Remapped	Perfect	NC_000023.11:g.(?_ 108440116)_(108696 388_?)del	GRCh38.p12	First Pass	NC_000023.11	ChrX	108,440,116	108,696,388
nssv16213358	Submitted genomic		NC_000023.10:g.(?_ 107683346)_(107939 618_?)del	GRCh37 (hg19)		NC_000023.10	ChrX	107,683,346	107,939,618

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID
nssv16213358	GRCh37: NC_000023.10:g.(?_107683346)_(107939618_?)del	deletion	germline	not provided	Pathogenic	ClinVar	RCV001031534.2, VCV000830937.2

No genotype data were submitted for this variant

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