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dbVar

Database of genomic structural variation

nsv469536

Organism: Homo sapiens

Study:nstd29 (Locke et al. 2006)
Variant Type:copy number variation
Method Type:BAC aCGH
Submitted on:NCBI34 (hg16)

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:152,620

Publication(s):Locke et al. 2006

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 821 SVs from 85 studies. See in: genome view

Remapped(Score: Perfect):153,783,565-153,936,184

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv469536	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	153,783,565	153,936,184
nsv469536	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	153,480,650	153,633,269
nsv469536	Submitted genomic		NCBI34 (hg16)	Primary Assembly		NC_000007.10	Chr7	152,872,390	153,025,009

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv1674283	copy number gain	BAC aCGH	Probe signal intensity
nssv1674423	copy number gain	BAC aCGH	Probe signal intensity
nssv1674550	copy number gain	BAC aCGH	Probe signal intensity
nssv1675865	copy number gain	BAC aCGH	Probe signal intensity
nssv1675986	copy number gain	BAC aCGH	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv1674283	Remapped	Perfect	NC_000007.14:g.(?_ 153783565)_(153936 184_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	153,783,565	153,936,184
nssv1674423	Remapped	Perfect	NC_000007.14:g.(?_ 153783565)_(153936 184_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	153,783,565	153,936,184
nssv1674550	Remapped	Perfect	NC_000007.14:g.(?_ 153783565)_(153936 184_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	153,783,565	153,936,184
nssv1675865	Remapped	Perfect	NC_000007.14:g.(?_ 153783565)_(153936 184_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	153,783,565	153,936,184
nssv1675986	Remapped	Perfect	NC_000007.14:g.(?_ 153783565)_(153936 184_?)dup	GRCh38.p12	First Pass	NC_000007.14	Chr7	153,783,565	153,936,184
nssv1674283	Remapped	Perfect	NC_000007.13:g.(?_ 153480650)_(153633 269_?)dup	GRCh37.p13	First Pass	NC_000007.13	Chr7	153,480,650	153,633,269
nssv1674423	Remapped	Perfect	NC_000007.13:g.(?_ 153480650)_(153633 269_?)dup	GRCh37.p13	First Pass	NC_000007.13	Chr7	153,480,650	153,633,269
nssv1674550	Remapped	Perfect	NC_000007.13:g.(?_ 153480650)_(153633 269_?)dup	GRCh37.p13	First Pass	NC_000007.13	Chr7	153,480,650	153,633,269
nssv1675865	Remapped	Perfect	NC_000007.13:g.(?_ 153480650)_(153633 269_?)dup	GRCh37.p13	First Pass	NC_000007.13	Chr7	153,480,650	153,633,269
nssv1675986	Remapped	Perfect	NC_000007.13:g.(?_ 153480650)_(153633 269_?)dup	GRCh37.p13	First Pass	NC_000007.13	Chr7	153,480,650	153,633,269
nssv1674283	Submitted genomic		NC_000007.10:g.(?_ 152872390)_(153025 009_?)dup	NCBI34 (hg16)		NC_000007.10	Chr7	152,872,390	153,025,009
nssv1674423	Submitted genomic		NC_000007.10:g.(?_ 152872390)_(153025 009_?)dup	NCBI34 (hg16)		NC_000007.10	Chr7	152,872,390	153,025,009
nssv1674550	Submitted genomic		NC_000007.10:g.(?_ 152872390)_(153025 009_?)dup	NCBI34 (hg16)		NC_000007.10	Chr7	152,872,390	153,025,009
nssv1675865	Submitted genomic		NC_000007.10:g.(?_ 152872390)_(153025 009_?)dup	NCBI34 (hg16)		NC_000007.10	Chr7	152,872,390	153,025,009
nssv1675986	Submitted genomic		NC_000007.10:g.(?_ 152872390)_(153025 009_?)dup	NCBI34 (hg16)		NC_000007.10	Chr7	152,872,390	153,025,009

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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