nsv469631
- Organism: Homo sapiens
- Study:nstd29 (Locke et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:158,028
- Publication(s):Locke et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 637 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 637 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 1 SVs from 1 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv469631 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 67,413,327 | 67,571,354 |
| nsv469631 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 66,878,314 | 67,036,341 |
| nsv469631 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000007.10 | Chr7 | 66,289,930 | 66,447,957 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1673707 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1676471 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1673707 | Remapped | Perfect | NC_000007.14:g.(?_ 67413327)_(6757135 4_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 67,413,327 | 67,571,354 |
| nssv1676471 | Remapped | Perfect | NC_000007.14:g.(?_ 67413327)_(6757135 4_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 67,413,327 | 67,571,354 |
| nssv1673707 | Remapped | Perfect | NC_000007.13:g.(?_ 66878314)_(6703634 1_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 66,878,314 | 67,036,341 |
| nssv1676471 | Remapped | Perfect | NC_000007.13:g.(?_ 66878314)_(6703634 1_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 66,878,314 | 67,036,341 |
| nssv1673707 | Submitted genomic | NC_000007.10:g.(?_ 66289930)_(6644795 7_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 66,289,930 | 66,447,957 | ||
| nssv1676471 | Submitted genomic | NC_000007.10:g.(?_ 66289930)_(6644795 7_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 66,289,930 | 66,447,957 |