nsv469706
- Organism: Homo sapiens
- Study:nstd29 (Locke et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:16
- Validation:Not tested
- Clinical Assertions: No
- Region Size:156,818
- Publication(s):Locke et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 376 SVs from 54 studies. See in: genome view
Overlapping variant regions from other studies: 376 SVs from 54 studies. See in: genome view
Overlapping variant regions from other studies: 1 SVs from 1 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv469706 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nsv469706 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nsv469706 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1672064 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1672083 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1672271 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1672537 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1672837 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1673387 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1673593 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1674294 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1675017 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1675027 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1675133 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1675143 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1675874 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1676447 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1676572 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1676580 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1672064 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1672083 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1672271 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1672537 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1672837 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1673387 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1673593 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1674294 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1675017 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1675027 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1675133 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1675143 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1675874 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1676447 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1676572 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1676580 | Remapped | Perfect | NC_000010.11:g.(?_ 78655013)_(7881183 0_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 78,655,013 | 78,811,830 |
| nssv1672064 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1672083 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1672271 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1672537 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1672837 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1673387 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1673593 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1674294 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1675017 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1675027 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1675133 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1675143 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1675874 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1676447 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1676572 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1676580 | Remapped | Perfect | NC_000010.10:g.(?_ 80414770)_(8057158 7_?)del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 80,414,770 | 80,571,587 |
| nssv1672064 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1672083 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1672271 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1672537 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1672837 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1673387 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1673593 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1674294 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1675017 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1675027 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1675133 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1675143 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1675874 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1676447 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1676572 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 | ||
| nssv1676580 | Submitted genomic | NC_000010.7:g.(?_7 9759373)_(79916190 _?)del | NCBI34 (hg16) | NC_000010.7 | Chr10 | 79,759,373 | 79,916,190 |