nsv469829
- Organism: Homo sapiens
- Study:nstd29 (Locke et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:4
- Validation:Not tested
- Clinical Assertions: No
- Region Size:181,389
- Publication(s):Locke et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 381 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 381 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 1 SVs from 1 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv469829 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 22,755,529 | 22,936,917 |
| nsv469829 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 23,082,022 | 23,263,410 |
| nsv469829 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000001.7 | Chr1 | 22,551,497 | 22,732,885 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1672672 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1672826 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1673091 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1676469 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1672672 | Remapped | Perfect | NC_000001.11:g.(?_ 22755529)_(2293691 7_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 22,755,529 | 22,936,917 |
| nssv1672826 | Remapped | Perfect | NC_000001.11:g.(?_ 22755529)_(2293691 7_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 22,755,529 | 22,936,917 |
| nssv1673091 | Remapped | Perfect | NC_000001.11:g.(?_ 22755529)_(2293691 7_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 22,755,529 | 22,936,917 |
| nssv1676469 | Remapped | Perfect | NC_000001.11:g.(?_ 22755529)_(2293691 7_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 22,755,529 | 22,936,917 |
| nssv1672672 | Remapped | Perfect | NC_000001.10:g.(?_ 23082022)_(2326341 0_?)del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 23,082,022 | 23,263,410 |
| nssv1672826 | Remapped | Perfect | NC_000001.10:g.(?_ 23082022)_(2326341 0_?)del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 23,082,022 | 23,263,410 |
| nssv1673091 | Remapped | Perfect | NC_000001.10:g.(?_ 23082022)_(2326341 0_?)del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 23,082,022 | 23,263,410 |
| nssv1676469 | Remapped | Perfect | NC_000001.10:g.(?_ 23082022)_(2326341 0_?)del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 23,082,022 | 23,263,410 |
| nssv1672672 | Submitted genomic | NC_000001.7:g.(?_2 2551497)_(22732885 _?)del | NCBI34 (hg16) | NC_000001.7 | Chr1 | 22,551,497 | 22,732,885 | ||
| nssv1672826 | Submitted genomic | NC_000001.7:g.(?_2 2551497)_(22732885 _?)del | NCBI34 (hg16) | NC_000001.7 | Chr1 | 22,551,497 | 22,732,885 | ||
| nssv1673091 | Submitted genomic | NC_000001.7:g.(?_2 2551497)_(22732885 _?)del | NCBI34 (hg16) | NC_000001.7 | Chr1 | 22,551,497 | 22,732,885 | ||
| nssv1676469 | Submitted genomic | NC_000001.7:g.(?_2 2551497)_(22732885 _?)del | NCBI34 (hg16) | NC_000001.7 | Chr1 | 22,551,497 | 22,732,885 |