nsv469870
- Organism: Homo sapiens
- Study:nstd29 (Locke et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:189,401
- Publication(s):Locke et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1588 SVs from 104 studies. See in: genome view
Overlapping variant regions from other studies: 1588 SVs from 104 studies. See in: genome view
Overlapping variant regions from other studies: 4 SVs from 2 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv469870 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 31,922,243 | 32,111,643 |
nsv469870 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 32,214,446 | 32,403,844 |
nsv469870 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000015.7 | Chr15 | 29,930,502 | 30,119,900 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv1673164 | copy number gain | BAC aCGH | Probe signal intensity |
nssv1673304 | copy number gain | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv1673164 | Remapped | Good | NC_000015.10:g.(?_ 31922243)_(3211164 3_?)dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 31,922,243 | 32,111,643 |
nssv1673304 | Remapped | Good | NC_000015.10:g.(?_ 31922243)_(3211164 3_?)dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 31,922,243 | 32,111,643 |
nssv1673164 | Remapped | Perfect | NC_000015.9:g.(?_3 2214446)_(32403844 _?)dup | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 32,214,446 | 32,403,844 |
nssv1673304 | Remapped | Perfect | NC_000015.9:g.(?_3 2214446)_(32403844 _?)dup | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 32,214,446 | 32,403,844 |
nssv1673164 | Submitted genomic | NC_000015.7:g.(?_2 9930502)_(30119900 _?)dup | NCBI34 (hg16) | NC_000015.7 | Chr15 | 29,930,502 | 30,119,900 | ||
nssv1673304 | Submitted genomic | NC_000015.7:g.(?_2 9930502)_(30119900 _?)dup | NCBI34 (hg16) | NC_000015.7 | Chr15 | 29,930,502 | 30,119,900 |