nsv469894
- Organism: Homo sapiens
- Study:nstd29 (Locke et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:187,705
- Publication(s):Locke et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1253 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 1253 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 1 SVs from 1 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv469894 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 26,558,113 | 26,745,817 |
| nsv469894 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 26,803,260 | 26,990,964 |
| nsv469894 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000015.7 | Chr15 | 24,350,621 | 24,538,325 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1675788 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1675788 | Remapped | Perfect | NC_000015.10:g.(?_ 26558113)_(2674581 7_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 26,558,113 | 26,745,817 |
| nssv1675788 | Remapped | Perfect | NC_000015.9:g.(?_2 6803260)_(26990964 _?)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 26,803,260 | 26,990,964 |
| nssv1675788 | Submitted genomic | NC_000015.7:g.(?_2 4350621)_(24538325 _?)del | NCBI34 (hg16) | NC_000015.7 | Chr15 | 24,350,621 | 24,538,325 |