nsv4711439
- Organism: Homo sapiens
- Study:nstd195 (Mwapagha et al. 2021)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Mwapagha et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 174 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 115 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 175 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 115 SVs from 22 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv4711439 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 110,948,966 | 110,948,966 | + |
nsv4711439 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 136,275,843 | 136,275,843 | + |
nsv4711439 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 110,284,665 | 110,284,665 | + | ||
nsv4711439 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 136,596,981 | 136,596,981 | + |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
---|---|---|---|---|---|---|
nssv16248116 | interchromosomal translocation | B381 | Sequencing | Paired-end mapping | 1 | 5,743 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv16248116 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 110,948,966 | 110,948,966 | + |
nssv16248116 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 136,275,843 | 136,275,843 | + |
nssv16248116 | Submitted genomic | GRCh37 (hg19) | NC_000005.9 | Chr5 | 110,284,665 | 110,284,665 | + | ||
nssv16248116 | Submitted genomic | GRCh37 (hg19) | NC_000006.11 | Chr6 | 136,596,981 | 136,596,981 | + |