nsv4715746
- Organism: Homo sapiens
- Study:nstd195 (Mwapagha et al. 2021)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Mwapagha et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2951 SVs from 72 studies. See in: genome view
Overlapping variant regions from other studies: 236 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 3076 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 236 SVs from 35 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv4715746 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 22,233,149 | 22,233,149 | - |
nsv4715746 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 87,524,264 | 87,524,264 | - |
nsv4715746 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 22,521,100 | 22,521,100 | - | ||
nsv4715746 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 87,557,870 | 87,557,870 | - |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
---|---|---|---|---|---|---|
nssv16232905 | interchromosomal translocation | M456 | Sequencing | Paired-end mapping | 1 | 4,735 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv16232905 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 22,233,149 | 22,233,149 | - |
nssv16232905 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 87,524,264 | 87,524,264 | - |
nssv16232905 | Submitted genomic | GRCh37 (hg19) | NC_000015.9 | Chr15 | 22,521,100 | 22,521,100 | - | ||
nssv16232905 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 87,557,870 | 87,557,870 | - |