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dbVar

Database of genomic structural variation

nsv4715834

Organism: Homo sapiens

Study:nstd195 (Mwapagha et al. 2021)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Mwapagha et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 199 SVs from 45 studies. See in: genome view

Remapped(Score: Perfect):132,342,373-132,342,373

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv4715834	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	132,342,373	132,342,373	+
nsv4715834	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	44,362,016	44,362,016	+
nsv4715834	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	133,099,946	133,099,946	+
nsv4715834	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	44,866,174	44,866,174	+

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Copy number	Other Calls in this Sample and Study
nssv16238444	interchromosomal translocation	M478	Sequencing	Paired-end mapping	1	4,557

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv16238444	Remapped	Perfect	GRCh38.p12	First Pass	NC_000002.12	Chr2	132,342,373	132,342,373	+
nssv16238444	Remapped	Perfect	GRCh38.p12	First Pass	NC_000019.10	Chr19	44,362,016	44,362,016	+
nssv16238444	Submitted genomic		GRCh37 (hg19)		NC_000002.11	Chr2	133,099,946	133,099,946	+
nssv16238444	Submitted genomic		GRCh37 (hg19)		NC_000019.9	Chr19	44,866,174	44,866,174	+

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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