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nsv471592

  • Variant Calls:4
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:104,517

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 457 SVs from 68 studies. See in: genome view    
Remapped(Score: Pass):144,925,645-145,030,161Question Mark
Overlapping variant regions from other studies: 96 SVs from 28 studies. See in: genome view    
Remapped(Score: Pass):1,728,746-1,816,696Question Mark
Overlapping variant regions from other studies: 88 SVs from 30 studies. See in: genome view    
Remapped(Score: Good):1,321,715-1,461,779Question Mark
Overlapping variant regions from other studies: 47 SVs from 19 studies. See in: genome view    
Remapped(Score: Pass):259,493-363,800Question Mark
Overlapping variant regions from other studies: 1 SVs from 1 studies. See in: genome view    
Submitted genomic141,751,323-141,891,622Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv471592RemappedPassGRCh38.p12Primary AssemblyFirst PassNC_000001.11Chr1144,925,645145,030,161
nsv471592RemappedPassGRCh37.p13PATCHESSecond PassNW_003871055.3Chr1|NW_00
3871055.3		1,728,7461,816,696
nsv471592RemappedGoodGRCh37.p13PATCHESSecond PassNW_003871056.3Chr1|NW_00
3871056.3		1,321,7151,461,779
nsv471592RemappedPassGRCh37.p13PATCHESSecond PassNW_003871057.1Chr1|NW_00
3871057.1		259,493363,800
nsv471592Submitted genomicNCBI34 (hg16)Primary AssemblyNC_000001.7Chr1141,751,323141,891,622

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv550368copy number lossGM10493BAC aCGHProbe signal intensity65
nssv550369copy number lossGM10494ABAC aCGHProbe signal intensity55
nssv550370copy number lossJK1061BAC aCGHProbe signal intensity51
nssv550371copy number lossJK1688BBAC aCGHProbe signal intensity53

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv550368RemappedPassNC_000001.11:g.(?_
144925645)_(145030
161_?)del		GRCh38.p12First PassNC_000001.11Chr1144,925,645145,030,161
nssv550369RemappedPassNC_000001.11:g.(?_
144925645)_(145030
161_?)del		GRCh38.p12First PassNC_000001.11Chr1144,925,645145,030,161
nssv550370RemappedPassNC_000001.11:g.(?_
144925645)_(145030
161_?)del		GRCh38.p12First PassNC_000001.11Chr1144,925,645145,030,161
nssv550371RemappedPassNC_000001.11:g.(?_
144925645)_(145030
161_?)del		GRCh38.p12First PassNC_000001.11Chr1144,925,645145,030,161
nssv550368RemappedPassNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871057.1Chr1|NW_00
3871057.1		259,493363,800
nssv550369RemappedPassNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871057.1Chr1|NW_00
3871057.1		259,493363,800
nssv550370RemappedPassNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871057.1Chr1|NW_00
3871057.1		259,493363,800
nssv550371RemappedPassNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871057.1Chr1|NW_00
3871057.1		259,493363,800
nssv550368RemappedGoodNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871056.3Chr1|NW_00
3871056.3		1,321,7151,461,779
nssv550369RemappedGoodNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871056.3Chr1|NW_00
3871056.3		1,321,7151,461,779
nssv550370RemappedGoodNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871056.3Chr1|NW_00
3871056.3		1,321,7151,461,779
nssv550371RemappedGoodNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871056.3Chr1|NW_00
3871056.3		1,321,7151,461,779
nssv550368RemappedPassNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871055.3Chr1|NW_00
3871055.3		1,728,7461,816,696
nssv550369RemappedPassNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871055.3Chr1|NW_00
3871055.3		1,728,7461,816,696
nssv550370RemappedPassNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871055.3Chr1|NW_00
3871055.3		1,728,7461,816,696
nssv550371RemappedPassNW_003871055.3:g.(
?_1728746)_(181669
6_?)delNW_00387105
6.3:g.(?_1321715)_
(1461779_?)delNW_0
03871057.1:g.(?_25
9493)_(363800_?)de
l		GRCh37.p13Second PassNW_003871055.3Chr1|NW_00
3871055.3		1,728,7461,816,696
nssv550368Submitted genomicNC_000001.7:g.(?_1
41751323)_(1418916
22_?)del		NCBI34 (hg16)NC_000001.7Chr1141,751,323141,891,622
nssv550369Submitted genomicNC_000001.7:g.(?_1
41751323)_(1418916
22_?)del		NCBI34 (hg16)NC_000001.7Chr1141,751,323141,891,622
nssv550370Submitted genomicNC_000001.7:g.(?_1
41751323)_(1418916
22_?)del		NCBI34 (hg16)NC_000001.7Chr1141,751,323141,891,622
nssv550371Submitted genomicNC_000001.7:g.(?_1
41751323)_(1418916
22_?)del		NCBI34 (hg16)NC_000001.7Chr1141,751,323141,891,622

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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