Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv4715938

Organism: Homo sapiens

Study:nstd195 (Mwapagha et al. 2021)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Mwapagha et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 110 SVs from 22 studies. See in: genome view

Remapped(Score: Perfect):118,751,115-118,751,115

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv4715938	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	118,751,115	118,751,115	+
nsv4715938	Remapped	Perfect	GRCh38.p12	Primary Assembly	Second Pass	NC_000013.11	Chr13	86,278,576	86,278,576	+
nsv4715938	Remapped	Perfect	GRCh38.p12	PATCHES	First Pass	NW_009646205.1	Chr13\|NW_0 09646205.1	21,162	21,162	+
nsv4715938	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	118,621,825	118,621,825	+
nsv4715938	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	86,930,839	86,930,839	+

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Copy number	Other Calls in this Sample and Study
nssv16236092	interchromosomal translocation	M456	Sequencing	Paired-end mapping	1	4,735

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv16236092	Remapped	Perfect	GRCh38.p12	First Pass	NC_000011.10	Chr11	118,751,115	118,751,115	+
nssv16236092	Remapped	Perfect	GRCh38.p12	First Pass	NW_009646205.1	Chr13\|NW_0 09646205.1	21,162	21,162	+
nssv16236092	Remapped	Perfect	GRCh38.p12	Second Pass	NC_000013.11	Chr13	86,278,576	86,278,576	+
nssv16236092	Submitted genomic		GRCh37 (hg19)		NC_000011.9	Chr11	118,621,825	118,621,825	+
nssv16236092	Submitted genomic		GRCh37 (hg19)		NC_000013.10	Chr13	86,930,839	86,930,839	+

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI