nsv4716089
- Organism: Homo sapiens
- Study:nstd195 (Mwapagha et al. 2021)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Mwapagha et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 198 SVs from 44 studies. See in: genome view
Overlapping variant regions from other studies: 117 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 201 SVs from 44 studies. See in: genome view
Overlapping variant regions from other studies: 117 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv4716089 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 132,323,474 | 132,323,474 | - |
| nsv4716089 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 44,381,821 | 44,381,821 | - |
| nsv4716089 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 133,081,047 | 133,081,047 | - | ||
| nsv4716089 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 44,885,982 | 44,885,982 | - |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv16243820 | interchromosomal translocation | B381 | Sequencing | Paired-end mapping | 1 | 5,743 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv16243820 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 132,323,474 | 132,323,474 | - |
| nssv16243820 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 44,381,821 | 44,381,821 | - |
| nssv16243820 | Submitted genomic | GRCh37 (hg19) | NC_000002.11 | Chr2 | 133,081,047 | 133,081,047 | - | ||
| nssv16243820 | Submitted genomic | GRCh37 (hg19) | NC_000019.9 | Chr19 | 44,885,982 | 44,885,982 | - |