nsv4716164
- Organism: Homo sapiens
- Study:nstd195 (Mwapagha et al. 2021)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Mwapagha et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 159 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 199 SVs from 46 studies. See in: genome view
Overlapping variant regions from other studies: 160 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 205 SVs from 47 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv4716164 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 75,942,150 | 75,942,150 | + |
| nsv4716164 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 26,226,198 | 26,226,198 | + |
| nsv4716164 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 75,991,301 | 75,991,301 | + | ||
| nsv4716164 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 26,206,834 | 26,206,834 | + |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv16241715 | interchromosomal translocation | M478 | Sequencing | Paired-end mapping | 1 | 4,557 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv16241715 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 75,942,150 | 75,942,150 | + |
| nssv16241715 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 26,226,198 | 26,226,198 | + |
| nssv16241715 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 75,991,301 | 75,991,301 | + | ||
| nssv16241715 | Submitted genomic | GRCh37 (hg19) | NC_000020.10 | Chr20 | 26,206,834 | 26,206,834 | + |