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nsv471621

  • Variant Calls:26
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:377,811

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 4397 SVs from 118 studies. See in: genome view    
Remapped(Score: Good):195,690,793-196,068,603Question Mark
Overlapping variant regions from other studies: 4400 SVs from 118 studies. See in: genome view    
Remapped(Score: Good):195,417,664-195,795,474Question Mark
Overlapping variant regions from other studies: 5 SVs from 3 studies. See in: genome view    
Submitted genomic196,744,969-197,121,995Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv471621RemappedGoodGRCh38.p12Primary AssemblyFirst PassNC_000003.12Chr3195,690,793196,068,603
nsv471621RemappedGoodGRCh37.p13Primary AssemblyFirst PassNC_000003.11Chr3195,417,664195,795,474
nsv471621Submitted genomicNCBI34 (hg16)Primary AssemblyNC_000003.8Chr3196,744,969197,121,995

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv549515copy number gainGM10469ABAC aCGHProbe signal intensity56
nssv549516copy number lossGM10495BBAC aCGHProbe signal intensity45
nssv549517copy number gainGM10976BAC aCGHProbe signal intensity56
nssv549518copy number lossGM10979BAC aCGHProbe signal intensity65
nssv549519copy number gainGM11523BAC aCGHProbe signal intensity54
nssv549520copy number lossGM15729BAC aCGHProbe signal intensity47
nssv549521copy number lossGM15733BAC aCGHProbe signal intensity51
nssv549522copy number gainGM16689BAC aCGHProbe signal intensity42
nssv549523copy number gainGM17058BAC aCGHProbe signal intensity54
nssv549524copy number gainJK1051ABAC aCGHProbe signal intensity53
nssv549525copy number gainP86GABAC aCGHProbe signal intensity50
nssv548772copy number gainGM10469ABAC aCGHProbe signal intensity56
nssv548773copy number gainGM10970BAC aCGHProbe signal intensity55
nssv548774copy number gainGM10971BAC aCGHProbe signal intensity56
nssv548775copy number gainGM10976BAC aCGHProbe signal intensity56
nssv548776copy number lossGM10979BAC aCGHProbe signal intensity65
nssv548777copy number lossGM15726BAC aCGHProbe signal intensity41
nssv548778copy number lossGM15727BAC aCGHProbe signal intensity44
nssv548779copy number lossGM15728BAC aCGHProbe signal intensity33
nssv548780copy number lossGM15729BAC aCGHProbe signal intensity47
nssv548781copy number lossGM15731BAC aCGHProbe signal intensity42
nssv548782copy number lossGM15733BAC aCGHProbe signal intensity51
nssv548783copy number gainGM16689BAC aCGHProbe signal intensity42
nssv548784copy number lossGM17015BAC aCGHProbe signal intensity60
nssv548785copy number gainGM17058BAC aCGHProbe signal intensity54
nssv548786copy number gainJK1051ABAC aCGHProbe signal intensity53

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv549515RemappedPassNT_187688.1:g.(?_1
)_(102169_?)dup
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549516RemappedPassNT_187688.1:g.(?_1
)_(102169_?)del
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549517RemappedPassNT_187688.1:g.(?_1
)_(102169_?)dup
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549518RemappedPassNT_187688.1:g.(?_1
)_(102169_?)del
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549519RemappedPassNT_187688.1:g.(?_1
)_(102169_?)dup
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549520RemappedPassNT_187688.1:g.(?_1
)_(102169_?)del
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549521RemappedPassNT_187688.1:g.(?_1
)_(102169_?)del
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549522RemappedPassNT_187688.1:g.(?_1
)_(102169_?)dup
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549523RemappedPassNT_187688.1:g.(?_1
)_(102169_?)dup
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549524RemappedPassNT_187688.1:g.(?_1
)_(102169_?)dup
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549525RemappedPassNT_187688.1:g.(?_1
)_(102169_?)dup
GRCh38.p12Second PassNT_187688.1Chr3|NT_18
7688.1
1102,169
nssv549515RemappedPassNT_187690.1:g.(?_1
)_(102881_?)dup
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549516RemappedPassNT_187690.1:g.(?_1
)_(102881_?)del
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549517RemappedPassNT_187690.1:g.(?_1
)_(102881_?)dup
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549518RemappedPassNT_187690.1:g.(?_1
)_(102881_?)del
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549519RemappedPassNT_187690.1:g.(?_1
)_(102881_?)dup
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549520RemappedPassNT_187690.1:g.(?_1
)_(102881_?)del
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549521RemappedPassNT_187690.1:g.(?_1
)_(102881_?)del
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549522RemappedPassNT_187690.1:g.(?_1
)_(102881_?)dup
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549523RemappedPassNT_187690.1:g.(?_1
)_(102881_?)dup
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549524RemappedPassNT_187690.1:g.(?_1
)_(102881_?)dup
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549525RemappedPassNT_187690.1:g.(?_1
)_(102881_?)dup
GRCh38.p12Second PassNT_187690.1Chr3|NT_18
7690.1
1102,881
nssv549515RemappedPassNT_187691.1:g.(?_1
)_(104318_?)dup
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549516RemappedPassNT_187691.1:g.(?_1
)_(104318_?)del
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549517RemappedPassNT_187691.1:g.(?_1
)_(104318_?)dup
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549518RemappedPassNT_187691.1:g.(?_1
)_(104318_?)del
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549519RemappedPassNT_187691.1:g.(?_1
)_(104318_?)dup
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549520RemappedPassNT_187691.1:g.(?_1
)_(104318_?)del
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549521RemappedPassNT_187691.1:g.(?_1
)_(104318_?)del
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549522RemappedPassNT_187691.1:g.(?_1
)_(104318_?)dup
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549523RemappedPassNT_187691.1:g.(?_1
)_(104318_?)dup
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549524RemappedPassNT_187691.1:g.(?_1
)_(104318_?)dup
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549525RemappedPassNT_187691.1:g.(?_1
)_(104318_?)dup
GRCh38.p12Second PassNT_187691.1Chr3|NT_18
7691.1
1104,318
nssv549515RemappedPassNT_187678.1:g.(?_1
)_(105251_?)dup
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549516RemappedPassNT_187678.1:g.(?_1
)_(105251_?)del
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549517RemappedPassNT_187678.1:g.(?_1
)_(105251_?)dup
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549518RemappedPassNT_187678.1:g.(?_1
)_(105251_?)del
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549519RemappedPassNT_187678.1:g.(?_1
)_(105251_?)dup
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549520RemappedPassNT_187678.1:g.(?_1
)_(105251_?)del
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549521RemappedPassNT_187678.1:g.(?_1
)_(105251_?)del
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549522RemappedPassNT_187678.1:g.(?_1
)_(105251_?)dup
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549523RemappedPassNT_187678.1:g.(?_1
)_(105251_?)dup
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549524RemappedPassNT_187678.1:g.(?_1
)_(105251_?)dup
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549525RemappedPassNT_187678.1:g.(?_1
)_(105251_?)dup
GRCh38.p12Second PassNT_187678.1Chr3|NT_18
7678.1
1105,251
nssv549515RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)du
p
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549516RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)de
l
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549517RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)du
p
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549518RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)de
l
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549519RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)du
p
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549520RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)de
l
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549521RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)de
l
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549522RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)du
p
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549523RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)du
p
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549524RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)du
p
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549525RemappedGoodNT_187689.1:g.(?_6
1290)_(197346_?)du
p
GRCh38.p12Second PassNT_187689.1Chr3|NT_18
7689.1
61,290197,346
nssv549515RemappedPassNT_187649.1:g.(?_1
)_(101607_?)dup
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549516RemappedPassNT_187649.1:g.(?_1
)_(101607_?)del
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549517RemappedPassNT_187649.1:g.(?_1
)_(101607_?)dup
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549518RemappedPassNT_187649.1:g.(?_1
)_(101607_?)del
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549519RemappedPassNT_187649.1:g.(?_1
)_(101607_?)dup
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549520RemappedPassNT_187649.1:g.(?_1
)_(101607_?)del
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549521RemappedPassNT_187649.1:g.(?_1
)_(101607_?)del
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549522RemappedPassNT_187649.1:g.(?_1
)_(101607_?)dup
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549523RemappedPassNT_187649.1:g.(?_1
)_(101607_?)dup
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549524RemappedPassNT_187649.1:g.(?_1
)_(101607_?)dup
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549525RemappedPassNT_187649.1:g.(?_1
)_(101607_?)dup
GRCh38.p12Second PassNT_187649.1Chr3|NT_18
7649.1
1101,607
nssv549515RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)du
p
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549516RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)de
l
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549517RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)du
p
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549518RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)de
l
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549519RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)du
p
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549520RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)de
l
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549521RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)de
l
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549522RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)du
p
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549523RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)du
p
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549524RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)du
p
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549525RemappedPassNT_187532.1:g.(?_6
1290)_(205307_?)du
p
GRCh38.p12Second PassNT_187532.1Chr3|NT_18
7532.1
61,290205,307
nssv549515RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv549516RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)del
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv549517RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv549518RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)del
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv549519RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv549520RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)del
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv549521RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)del
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv549522RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv549523RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv549524RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv549525RemappedGoodNC_000003.12:g.(?_
195690793)_(195827
487_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,690,793195,827,487
nssv548772RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548773RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548774RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548775RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548776RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)del
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548777RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)del
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548778RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)del
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548779RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)del
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548780RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)del
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548781RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)del
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548782RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)del
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
nssv548783RemappedPerfectNC_000003.12:g.(?_
195896852)_(196068
603_?)dup
GRCh38.p12First PassNC_000003.12Chr3195,896,852196,068,603
Showing 100 of 155

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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