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dbVar

Database of genomic structural variation

nsv4716262

Organism: Homo sapiens

Study:nstd195 (Mwapagha et al. 2021)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Mwapagha et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 125 SVs from 24 studies. See in: genome view

Remapped(Score: Perfect):163,012,395-163,012,395

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv4716262	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	163,012,395	163,012,395	-
nsv4716262	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	12,256,886	12,256,886	-
nsv4716262	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	162,982,185	162,982,185	-
nsv4716262	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	12,298,385	12,298,385	-

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Copy number	Other Calls in this Sample and Study
nssv16244522	interchromosomal translocation	B381	Sequencing	Paired-end mapping	1	5,743

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv16244522	Remapped	Perfect	GRCh38.p12	First Pass	NC_000001.11	Chr1	163,012,395	163,012,395	-
nssv16244522	Remapped	Perfect	GRCh38.p12	First Pass	NC_000003.12	Chr3	12,256,886	12,256,886	-
nssv16244522	Submitted genomic		GRCh37 (hg19)		NC_000001.10	Chr1	162,982,185	162,982,185	-
nssv16244522	Submitted genomic		GRCh37 (hg19)		NC_000003.11	Chr3	12,298,385	12,298,385	-

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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