nsv4716316
- Organism: Homo sapiens
- Study:nstd195 (Mwapagha et al. 2021)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Mwapagha et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 165 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 196 SVs from 46 studies. See in: genome view
Overlapping variant regions from other studies: 166 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 202 SVs from 47 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv4716316 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 75,945,388 | 75,945,388 | - |
nsv4716316 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 26,222,914 | 26,222,914 | - |
nsv4716316 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 75,994,539 | 75,994,539 | - | ||
nsv4716316 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 26,203,550 | 26,203,550 | - |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
---|---|---|---|---|---|---|
nssv16248580 | interchromosomal translocation | B450 | Sequencing | Paired-end mapping | 1 | 4,473 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv16248580 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 75,945,388 | 75,945,388 | - |
nssv16248580 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 26,222,914 | 26,222,914 | - |
nssv16248580 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 75,994,539 | 75,994,539 | - | ||
nssv16248580 | Submitted genomic | GRCh37 (hg19) | NC_000020.10 | Chr20 | 26,203,550 | 26,203,550 | - |