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dbVar

Database of genomic structural variation

nsv4716397

Organism: Homo sapiens

Study:nstd195 (Mwapagha et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:2

Publication(s):Mwapagha et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 253 SVs from 48 studies. See in: genome view

Remapped(Score: Perfect):23,803,591-23,803,592

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4716397	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	23,803,591	23,803,592
nsv4716397	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	23,986,393	23,986,394

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Copy number	Other Calls in this Sample and Study
nssv16235095	deletion	M456	Sequencing	Paired-end mapping	1	4,735
nssv16241204	deletion	M478	Sequencing	Paired-end mapping	1	4,557
nssv16242814	deletion	B381	Sequencing	Paired-end mapping	1	5,743
nssv16247237	deletion	B450	Sequencing	Paired-end mapping	1	4,473

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16235095	Remapped	Perfect	NC_000019.10:g.238 03591_23803592del	GRCh38.p12	First Pass	NC_000019.10	Chr19	23,803,591	23,803,592
nssv16241204	Remapped	Perfect	NC_000019.10:g.238 03591_23803592del	GRCh38.p12	First Pass	NC_000019.10	Chr19	23,803,591	23,803,592
nssv16242814	Remapped	Perfect	NC_000019.10:g.238 03591_23803592del	GRCh38.p12	First Pass	NC_000019.10	Chr19	23,803,591	23,803,592
nssv16247237	Remapped	Perfect	NC_000019.10:g.238 03591_23803592del	GRCh38.p12	First Pass	NC_000019.10	Chr19	23,803,591	23,803,592
nssv16235095	Submitted genomic		NC_000019.9:g.2398 6393_23986394del	GRCh37 (hg19)		NC_000019.9	Chr19	23,986,393	23,986,394
nssv16241204	Submitted genomic		NC_000019.9:g.2398 6393_23986394del	GRCh37 (hg19)		NC_000019.9	Chr19	23,986,393	23,986,394
nssv16242814	Submitted genomic		NC_000019.9:g.2398 6393_23986394del	GRCh37 (hg19)		NC_000019.9	Chr19	23,986,393	23,986,394
nssv16247237	Submitted genomic		NC_000019.9:g.2398 6393_23986394del	GRCh37 (hg19)		NC_000019.9	Chr19	23,986,393	23,986,394

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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