nsv4716404
- Organism: Homo sapiens
- Study:nstd195 (Mwapagha et al. 2021)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Mwapagha et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 454 SVs from 72 studies. See in: genome view
Overlapping variant regions from other studies: 1786 SVs from 71 studies. See in: genome view
Overlapping variant regions from other studies: 454 SVs from 72 studies. See in: genome view
Overlapping variant regions from other studies: 1789 SVs from 72 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv4716404 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 97,153,284 | 97,153,284 | - |
| nsv4716404 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 33,739,254 | 33,739,254 | - |
| nsv4716404 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 97,819,021 | 97,819,021 | - | ||
| nsv4716404 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 33,541,721 | 33,541,721 | - |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv16240738 | interchromosomal translocation | B381 | Sequencing | Paired-end mapping | 1 | 5,743 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv16240738 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 97,153,284 | 97,153,284 | - |
| nssv16240738 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 33,739,254 | 33,739,254 | - |
| nssv16240738 | Submitted genomic | GRCh37 (hg19) | NC_000002.11 | Chr2 | 97,819,021 | 97,819,021 | - | ||
| nssv16240738 | Submitted genomic | GRCh37 (hg19) | NC_000016.9 | Chr16 | 33,541,721 | 33,541,721 | - |