nsv4728331
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1,081,642
- Description:GRCh37/hg19 Xp21.1-11.4(chrX:37487291-38568933)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1616 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 1617 SVs from 70 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4728331 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 37,628,038 | 38,709,679 |
| nsv4728331 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 37,487,291 | 38,568,933 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16254109 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001258967.1, VCV000979791.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16254109 | Remapped | Perfect | NC_000023.11:g.(?_ 37628038)_(3870967 9_?)dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 37,628,038 | 38,709,679 |
| nssv16254109 | Submitted genomic | NC_000023.10:g.(?_ 37487291)_(3856893 3_?)dup | GRCh37 (hg19) | NC_000023.10 | ChrX | 37,487,291 | 38,568,933 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16254109 | GRCh37: NC_000023.10:g.(?_37487291)_(38568933_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV001258967.1, VCV000979791.1 | 3 |