nsv4728644
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:465,742
- Description:GRCh37/hg19 Xq22.1(chrX:99581496-100047228)x2 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 727 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 728 SVs from 53 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4728644 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 100,326,498 | 100,792,239 |
| nsv4728644 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 99,581,496 | 100,047,228 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16254368 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001259487.1, VCV000980311.1 | 2 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16254368 | Remapped | Good | NC_000023.11:g.(?_ 100326498)_(100792 239_?)dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 100,326,498 | 100,792,239 |
| nssv16254368 | Submitted genomic | NC_000023.10:g.(?_ 99581496)_(1000472 28_?)dup | GRCh37 (hg19) | NC_000023.10 | ChrX | 99,581,496 | 100,047,228 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16254368 | GRCh37: NC_000023.10:g.(?_99581496)_(100047228_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV001259487.1, VCV000980311.1 | 2 |