nsv4728732
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:174,400
- Description:GRCh37/hg19 3q27.3(chr3:186493742-186668140)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 785 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 785 SVs from 85 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4728732 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 186,775,953 | 186,950,352 |
| nsv4728732 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 186,493,742 | 186,668,140 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16255539 | copy number gain | Multiple | Multiple | not provided | Likely benign | ClinVar | RCV001259732.1, VCV000980556.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16255539 | Remapped | Good | NC_000003.12:g.(?_ 186775953)_(186950 352_?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 186,775,953 | 186,950,352 |
| nssv16255539 | Submitted genomic | NC_000003.11:g.(?_ 186493742)_(186668 140_?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 186,493,742 | 186,668,140 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16255539 | GRCh37: NC_000003.11:g.(?_186493742)_(186668140_?)dup | copy number gain | germline | not provided | Likely benign | ClinVar | RCV001259732.1, VCV000980556.1 | 3 |