nsv4729020
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:953,698
- Description:GRCh37/hg19 7p22.1(chr7:6183858-7137555)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3887 SVs from 106 studies. See in: genome view
Overlapping variant regions from other studies: 3887 SVs from 106 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4729020 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 6,144,227 | 7,097,924 |
| nsv4729020 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 6,183,858 | 7,137,555 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16255354 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001259435.1, VCV000980259.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16255354 | Remapped | Perfect | NC_000007.14:g.(?_ 6144227)_(7097924_ ?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 6,144,227 | 7,097,924 |
| nssv16255354 | Submitted genomic | NC_000007.13:g.(?_ 6183858)_(7137555_ ?)dup | GRCh37 (hg19) | NC_000007.13 | Chr7 | 6,183,858 | 7,137,555 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16255354 | GRCh37: NC_000007.13:g.(?_6183858)_(7137555_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV001259435.1, VCV000980259.1 | 3 |