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dbVar

Database of genomic structural variation

nsv4730177

Organism: Homo sapiens

Study:nstd198 (Hanlon et al. 2021)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:8
Validation:Not tested
Clinical Assertions: No
Region Size:9,844

Publication(s):Hanlon et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 183 SVs from 38 studies. See in: genome view

Submitted genomic131,968,695-131,978,538

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4730177	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	131,968,695	131,978,538
nsv4730177	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	131,687,539	131,697,382

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
nssv16256947	inversion	HG00514	Sequencing	Genotyping	Heterozygous	338
nssv16256006	inversion	HG00514	Sequencing	Genotyping	Heterozygous	338
nssv16256479	inversion	HG00512	Sequencing	Genotyping	Heterozygous	328
nssv16257708	inversion	HG00512	Sequencing	Genotyping	Heterozygous	328
nssv16258648	inversion	HG00514	Sequencing	Genotyping	Heterozygous	338
nssv16257660	inversion	HG00512	Sequencing	Genotyping	Heterozygous	328
nssv16257815	inversion	HG00514	Sequencing	Genotyping	Heterozygous	338
nssv16257846	inversion	HG00512	Sequencing	Genotyping	Heterozygous	328

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16256947	Submitted genomic		NC_000003.12:g.131 968695_131978060in v	GRCh38 (hg38)		NC_000003.12	Chr3	131,968,695	131,978,060
nssv16256006	Submitted genomic		NC_000003.12:g.131 968697_131978538in v	GRCh38 (hg38)		NC_000003.12	Chr3	131,968,697	131,978,538
nssv16256479	Submitted genomic		NC_000003.12:g.131 968697_131978538in v	GRCh38 (hg38)		NC_000003.12	Chr3	131,968,697	131,978,538
nssv16257708	Submitted genomic		NC_000003.12:g.131 968697_131978538in v	GRCh38 (hg38)		NC_000003.12	Chr3	131,968,697	131,978,538
nssv16258648	Submitted genomic		NC_000003.12:g.131 968697_131978538in v	GRCh38 (hg38)		NC_000003.12	Chr3	131,968,697	131,978,538
nssv16257660	Submitted genomic		NC_000003.12:g.131 969241_131978043in v	GRCh38 (hg38)		NC_000003.12	Chr3	131,969,241	131,978,043
nssv16257815	Submitted genomic		NC_000003.12:g.131 969241_131978043in v	GRCh38 (hg38)		NC_000003.12	Chr3	131,969,241	131,978,043
nssv16257846	Submitted genomic		NC_000003.12:g.131 969886_131977466in v	GRCh38 (hg38)		NC_000003.12	Chr3	131,969,886	131,977,466
nssv16256947	Remapped	Perfect	NC_000003.11:g.131 687539_131696904in v	GRCh37.p13	First Pass	NC_000003.11	Chr3	131,687,539	131,696,904
nssv16256006	Remapped	Perfect	NC_000003.11:g.131 687541_131697382in v	GRCh37.p13	First Pass	NC_000003.11	Chr3	131,687,541	131,697,382
nssv16256479	Remapped	Perfect	NC_000003.11:g.131 687541_131697382in v	GRCh37.p13	First Pass	NC_000003.11	Chr3	131,687,541	131,697,382
nssv16257708	Remapped	Perfect	NC_000003.11:g.131 687541_131697382in v	GRCh37.p13	First Pass	NC_000003.11	Chr3	131,687,541	131,697,382
nssv16258648	Remapped	Perfect	NC_000003.11:g.131 687541_131697382in v	GRCh37.p13	First Pass	NC_000003.11	Chr3	131,687,541	131,697,382
nssv16257660	Remapped	Perfect	NC_000003.11:g.131 688085_131696887in v	GRCh37.p13	First Pass	NC_000003.11	Chr3	131,688,085	131,696,887
nssv16257815	Remapped	Perfect	NC_000003.11:g.131 688085_131696887in v	GRCh37.p13	First Pass	NC_000003.11	Chr3	131,688,085	131,696,887
nssv16257846	Remapped	Perfect	NC_000003.11:g.131 688730_131696310in v	GRCh37.p13	First Pass	NC_000003.11	Chr3	131,688,730	131,696,310

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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