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dbVar

Database of genomic structural variation

nsv473523

Organism: Homo sapiens

Study:nstd35 (Kidd et al. 2010)
Variant Type:complex substitution
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3

Description:complex allele - no allele length provided
Publication(s):Kidd et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 564 SVs from 55 studies. See in: genome view

Remapped(Score: Perfect):105,477,698-105,477,700

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv473523	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	105,477,698	105,477,700
nsv473523	Remapped	Perfect	GRCh37.p13	Primary Assembly	Second Pass	NC_000014.8	Chr14	105,944,035	105,944,037
nsv473523	Remapped	Perfect	GRCh37.p13	PATCHES	First Pass	NW_004166863.1	Chr14\|NW_0 04166863.1	140,865	140,867
nsv473523	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000014.7	Chr14	105,015,080	105,015,082

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv3013852	complex substitution	NA19129	Sequencing	Sequence alignment	871

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv3013852	Remapped	Perfect	GRCh38.p12	First Pass	NC_000014.9	Chr14	105,477,698	105,477,700
nssv3013852	Remapped	Perfect	GRCh37.p13	First Pass	NW_004166863.1	Chr14\|NW_0 04166863.1	140,865	140,867
nssv3013852	Remapped	Perfect	GRCh37.p13	Second Pass	NC_000014.8	Chr14	105,944,035	105,944,037
nssv3013852	Submitted genomic		NCBI36 (hg18)		NC_000014.7	Chr14	105,015,080	105,015,082

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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