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dbVar

Database of genomic structural variation

nsv4769354

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:400,972

Description:GRCh37/hg19 Xp22.33(chrX:534390-935361)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 3523 SVs from 63 studies. See in: genome view

Remapped(Score: Perfect):573,655-974,626

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4769354	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	573,655	974,626
nsv4769354	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	534,390	935,361

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv16297078	copy number loss	Multiple	Multiple	not provided	Pathogenic	ClinVar	RCV001270672.4, VCV000988942.4	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16297078	Remapped	Perfect	NC_000023.11:g.573 655_974626del	GRCh38.p12	First Pass	NC_000023.11	ChrX	573,655	974,626
nssv16297078	Submitted genomic		NC_000023.10:g.534 390_935361del	GRCh37 (hg19)		NC_000023.10	ChrX	534,390	935,361

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv16297078	GRCh37: NC_000023.10:g.534390_935361del	copy number loss	unknown	not provided	Pathogenic	ClinVar	RCV001270672.4, VCV000988942.4	1

No genotype data were submitted for this variant

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