nsv4772444
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:536,375
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2244 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 2119 SVs from 58 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4772444 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 1,907,463 (-160) | 2,443,837 (+137) |
| nsv4772444 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 2,026,356 (-160) | 2,361,878 (+137) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16409448 | duplication | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16409448 | Remapped | Pass | NC_000023.11:g.(19 07303_?)_(?_244397 4)dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 1,907,463 (-160) | 2,443,837 (+137) |
| nssv16409448 | Submitted genomic | NC_000023.10:g.(20 26196_?)_(?_236201 5)dup | GRCh37 (hg19) | NC_000023.10 | ChrX | 2,026,356 (-160) | 2,361,878 (+137) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16409448 | <0.001 | 1 | 16834 |