nsv4781754
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:52,502
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 293 SVs from 46 studies. See in: genome view
Overlapping variant regions from other studies: 293 SVs from 46 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4781754 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 121,688,689 (-144, +2) | 121,741,190 (-1, +140) |
nsv4781754 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 122,446,265 (-144, +2) | 122,498,766 (-1, +140) |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv16391408 | duplication | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16391408 | Remapped | Perfect | NC_000002.12:g.(12 1688545_121688691) _(121741189_121741 330)dup | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 121,688,689 (-144, +2) | 121,741,190 (-1, +140) |
nssv16391408 | Submitted genomic | NC_000002.11:g.(12 2446121_122446267) _(122498765_122498 906)dup | GRCh37 (hg19) | NC_000002.11 | Chr2 | 122,446,265 (-144, +2) | 122,498,766 (-1, +140) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv16391408 | <0.001 | 1 | 16834 |