nsv479886
- Organism: Homo sapiens
- Study:nstd35 (Kidd et al. 2010)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Variant is Defined by:GU267392
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,108
- Description:This variant by definition has no placement. It represents a contig assembled from multiple read pairs, no part of which could be mapped to assembly NCBI35.
- Publication(s):Kidd et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:
Overlapping variant regions from other studies: 82 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nsv479886 | Remapped | Good | GRCh38.p12 | Primary Assembly | NT_032977.10 | Chr1|NT_03 2977.10 | 24,908,628 | 24,909,735 |
| nsv479886 | Remapped | Good | GRCh37.p13 | Primary Assembly | NC_000001.10 | Chr1 | 25,821,107 | 25,822,214 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3011063 | novel sequence insertion | Sequencing | One end anchored assembly |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv3011063 | Remapped | Good | NT_032977.10:g.249 08628_24909735ins? | GRCh38.p12 | NT_032977.10 | Chr1|NT_03 2977.10 | 24,908,628 | 24,909,735 |
| nssv3011063 | Remapped | Good | NC_000001.10:g.258 21107_25822214ins? | GRCh37.p13 | NC_000001.10 | Chr1 | 25,821,107 | 25,822,214 |