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dbVar

Database of genomic structural variation

nsv480216

Organism: Homo sapiens

Study:nstd35 (Kidd et al. 2010)
Variant Type:novel sequence insertion
Method Type:Sequencing
Variant is Defined by:GU267722

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:933

Description:This variant by definition has no placement. It represents a contig assembled from multiple read pairs, no part of which could be mapped to assembly NCBI35.
Publication(s):Kidd et al. 2010

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Remapped(Score: Good):50,011-50,943

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Sequence ID	Chr	Start	Stop
nsv480216	Remapped	Good	GRCh38.p12	Primary Assembly	NT_167197.2	ChrX\|NT_16 7197.2	50,011	50,943
nsv480216	Remapped	Good	GRCh38.p12	Primary Assembly	NT_167205.2	ChrY\|NT_16 7205.2	50,011	50,943

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv3014512	novel sequence insertion	Sequencing	One end anchored assembly

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Sequence ID	Chr	Start	Stop
nssv3014512	Remapped	Good	NT_167197.2:g.5001 1_50943ins?NT_1672 05.2:g.50011_50943 ins?	GRCh38.p12	NT_167197.2	ChrX\|NT_16 7197.2	50,011	50,943
nssv3014512	Remapped	Good	NT_167197.2:g.5001 1_50943ins?NT_1672 05.2:g.50011_50943 ins?	GRCh38.p12	NT_167205.2	ChrY\|NT_16 7205.2	50,011	50,943

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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