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dbVar

Database of genomic structural variation

nsv480766

Organism: Homo sapiens

Study:nstd35 (Kidd et al. 2010)
Variant Type:novel sequence insertion
Method Type:Sequencing
Variant is Defined by:GU268271

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:804

Description:This variant by definition has no placement. It represents a contig assembled from multiple read pairs, no part of which could be mapped to assembly NCBI35.
Publication(s):Kidd et al. 2010

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Remapped(Score: Good):12,839-13,642

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Sequence ID	Chr	Start	Stop
nsv480766	Remapped	Good	GRCh38.p12	Primary Assembly	NT_167197.2	ChrX\|NT_16 7197.2	12,839	13,642
nsv480766	Remapped	Good	GRCh38.p12	Primary Assembly	NT_167205.2	ChrY\|NT_16 7205.2	12,839	13,642

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv3017055	novel sequence insertion	Sequencing	One end anchored assembly

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Sequence ID	Chr	Start	Stop
nssv3017055	Remapped	Good	NT_167197.2:g.1283 9_13642ins?NT_1672 05.2:g.12839_13642 ins?	GRCh38.p12	NT_167197.2	ChrX\|NT_16 7197.2	12,839	13,642
nssv3017055	Remapped	Good	NT_167197.2:g.1283 9_13642ins?NT_1672 05.2:g.12839_13642 ins?	GRCh38.p12	NT_167205.2	ChrY\|NT_16 7205.2	12,839	13,642

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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