nsv481900
- Organism: Homo sapiens
- Study:nstd36 (Mitsui et al. 2010)
- Variant Type:copy number variation
- Method Type:Oligo aCGH, Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:134,488
- Publication(s):Mitsui et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1079 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 1080 SVs from 51 studies. See in: genome view
Overlapping variant regions from other studies: 278 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv481900 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 31,752,672 | 31,887,159 |
| nsv481900 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 31,770,789 | 31,905,276 |
| nsv481900 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 31,680,710 | 31,815,197 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv650180 | duplication | Oligo aCGH, Sequencing | Probe signal intensity, Sequence alignment | Muscular Dystrophy, Duchenne | Pathogenic | Submitter |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv650180 | Remapped | Perfect | NC_000023.11:g.317 52672_31887159dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 31,752,672 | 31,887,159 |
| nssv650180 | Remapped | Perfect | NC_000023.10:g.317 70789_31905276dup | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 31,770,789 | 31,905,276 |
| nssv650180 | Submitted genomic | NC_000023.9:g.3168 0710_31815197dup | NCBI36 (hg18) | NC_000023.9 | ChrX | 31,680,710 | 31,815,197 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|
| nssv650180 | NCBI36: NC_000023.9:g.31680710_31815197dup | duplication | Muscular Dystrophy, Duchenne | Pathogenic | Submitter |