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dbVar

Database of genomic structural variation

nsv482292

Organism: Homo sapiens

Study:nstd40 (Sharp et al. 2006)
Variant Type:copy number variation
Method Type:BAC aCGH
Submitted on:NCBI34 (hg16)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:165,066

Publication(s):Sharp et al. 2006

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 713 SVs from 70 studies. See in: genome view

Remapped(Score: Perfect):86,808,158-86,973,223

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv482292	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	86,808,158	86,973,223
nsv482292	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	86,841,764	87,006,829
nsv482292	Submitted genomic		NCBI34 (hg16)	Primary Assembly		NC_000016.7	Chr16	86,623,244	86,788,309

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv3006675	copy number gain	BAC aCGH	Probe signal intensity
nssv3010272	copy number gain	BAC aCGH	Probe signal intensity
nssv3010661	copy number gain	BAC aCGH	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv3006675	Remapped	Perfect	NC_000016.10:g.(?_ 86808158)_(8697322 3_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	86,808,158	86,973,223
nssv3010272	Remapped	Perfect	NC_000016.10:g.(?_ 86808158)_(8697322 3_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	86,808,158	86,973,223
nssv3010661	Remapped	Perfect	NC_000016.10:g.(?_ 86808158)_(8697322 3_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	86,808,158	86,973,223
nssv3006675	Remapped	Perfect	NC_000016.9:g.(?_8 6841764)_(87006829 _?)dup	GRCh37.p13	First Pass	NC_000016.9	Chr16	86,841,764	87,006,829
nssv3010272	Remapped	Perfect	NC_000016.9:g.(?_8 6841764)_(87006829 _?)dup	GRCh37.p13	First Pass	NC_000016.9	Chr16	86,841,764	87,006,829
nssv3010661	Remapped	Perfect	NC_000016.9:g.(?_8 6841764)_(87006829 _?)dup	GRCh37.p13	First Pass	NC_000016.9	Chr16	86,841,764	87,006,829
nssv3006675	Submitted genomic		NC_000016.7:g.(?_8 6623244)_(86788309 _?)dup	NCBI34 (hg16)		NC_000016.7	Chr16	86,623,244	86,788,309
nssv3010272	Submitted genomic		NC_000016.7:g.(?_8 6623244)_(86788309 _?)dup	NCBI34 (hg16)		NC_000016.7	Chr16	86,623,244	86,788,309
nssv3010661	Submitted genomic		NC_000016.7:g.(?_8 6623244)_(86788309 _?)dup	NCBI34 (hg16)		NC_000016.7	Chr16	86,623,244	86,788,309

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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