nsv482466
- Organism: Homo sapiens
- Study:nstd40 (Sharp et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:3
- Validation:Not tested
- Clinical Assertions: No
- Region Size:94,309
- Publication(s):Sharp et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1677 SVs from 71 studies. See in: genome view
Overlapping variant regions from other studies: 2764 SVs from 74 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv482466 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 46,380,687 | 46,474,995 |
nsv482466 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 46,385,802 | 46,508,907 |
nsv482466 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000016.7 | Chr16 | 46,166,888 | 46,289,995 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv3005979 | copy number gain | BAC aCGH | Probe signal intensity |
nssv3008643 | copy number gain | BAC aCGH | Probe signal intensity |
nssv3008646 | copy number gain | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv3005979 | Remapped | Pass | NC_000016.10:g.(?_ 46380687)_(4647499 5_?)dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 46,380,687 | 46,474,995 |
nssv3008643 | Remapped | Pass | NC_000016.10:g.(?_ 46380687)_(4647499 5_?)dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 46,380,687 | 46,474,995 |
nssv3008646 | Remapped | Pass | NC_000016.10:g.(?_ 46380687)_(4647499 5_?)dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 46,380,687 | 46,474,995 |
nssv3005979 | Remapped | Good | NC_000016.9:g.(?_4 6385802)_(46508907 _?)dup | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 46,385,802 | 46,508,907 |
nssv3008643 | Remapped | Good | NC_000016.9:g.(?_4 6385802)_(46508907 _?)dup | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 46,385,802 | 46,508,907 |
nssv3008646 | Remapped | Good | NC_000016.9:g.(?_4 6385802)_(46508907 _?)dup | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 46,385,802 | 46,508,907 |
nssv3005979 | Submitted genomic | NC_000016.7:g.(?_4 6166888)_(46289995 _?)dup | NCBI34 (hg16) | NC_000016.7 | Chr16 | 46,166,888 | 46,289,995 | ||
nssv3008643 | Submitted genomic | NC_000016.7:g.(?_4 6166888)_(46289995 _?)dup | NCBI34 (hg16) | NC_000016.7 | Chr16 | 46,166,888 | 46,289,995 | ||
nssv3008646 | Submitted genomic | NC_000016.7:g.(?_4 6166888)_(46289995 _?)dup | NCBI34 (hg16) | NC_000016.7 | Chr16 | 46,166,888 | 46,289,995 |