nsv482521
- Organism: Homo sapiens
- Study:nstd40 (Sharp et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:16
- Validation:Not tested
- Clinical Assertions: No
- Region Size:177,904
- Publication(s):Sharp et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 694 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 434 SVs from 57 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv482521 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nsv482521 | Remapped | Pass | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nsv482521 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3005923 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3006413 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3006669 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3006755 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3007283 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3007593 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3007961 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3008158 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3008309 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3008637 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3008748 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3009271 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3009444 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3010204 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3010210 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv3010556 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3005923 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3006413 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3006669 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3006755 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3007283 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3007593 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3007961 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3008158 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3008309 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3008637 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3008748 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3009271 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3009444 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3010204 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3010210 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3010556 | Remapped | Perfect | NC_000007.14:g.(?_ 101960722)_(102138 625_?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,960,722 | 102,138,625 |
| nssv3005923 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3006413 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3006669 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3006755 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3007283 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3007593 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3007961 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3008158 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3008309 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3008637 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3008748 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3009271 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3009444 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3010204 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3010210 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3010556 | Remapped | Pass | NC_000007.13:g.(?_ 101604002)_(101718 950_?)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 101,604,002 | 101,718,950 |
| nssv3005923 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3006413 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3006669 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3006755 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3007283 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3007593 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3007961 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3008158 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3008309 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3008637 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3008748 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3009271 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3009444 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3010204 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3010210 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 | ||
| nssv3010556 | Submitted genomic | NC_000007.10:g.(?_ 101164183)_(101342 086_?)del | NCBI34 (hg16) | NC_000007.10 | Chr7 | 101,164,183 | 101,342,086 |