nsv482970
- Organism: Homo sapiens
- Study:nstd41 (Iafrate et al. 2004)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:9
- Validation:Not tested
- Clinical Assertions: No
- Region Size:157,441
- Publication(s):Iafrate et al. 2004
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 713 SVs from 75 studies. See in: genome view
Overlapping variant regions from other studies: 713 SVs from 75 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv482970 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 177,555,081 | 177,712,521 |
nsv482970 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 177,272,869 | 177,430,309 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv2995928 | copy number loss | BAC aCGH | Probe signal intensity |
nssv2995956 | copy number loss | BAC aCGH | Probe signal intensity |
nssv2996044 | copy number loss | BAC aCGH | Probe signal intensity |
nssv2996093 | copy number loss | BAC aCGH | Probe signal intensity |
nssv2996142 | copy number loss | BAC aCGH | Probe signal intensity |
nssv2996235 | copy number gain | BAC aCGH | Probe signal intensity |
nssv2996274 | copy number loss | BAC aCGH | Probe signal intensity |
nssv2996275 | copy number loss | BAC aCGH | Probe signal intensity |
nssv2996490 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv2995928 | Remapped | Perfect | NC_000003.12:g.(?_ 177555081)_(177712 521_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 177,555,081 | 177,712,521 |
nssv2995956 | Remapped | Perfect | NC_000003.12:g.(?_ 177555081)_(177712 521_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 177,555,081 | 177,712,521 |
nssv2996044 | Remapped | Perfect | NC_000003.12:g.(?_ 177555081)_(177712 521_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 177,555,081 | 177,712,521 |
nssv2996093 | Remapped | Perfect | NC_000003.12:g.(?_ 177555081)_(177712 521_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 177,555,081 | 177,712,521 |
nssv2996142 | Remapped | Perfect | NC_000003.12:g.(?_ 177555081)_(177712 521_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 177,555,081 | 177,712,521 |
nssv2996235 | Remapped | Perfect | NC_000003.12:g.(?_ 177555081)_(177712 521_?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 177,555,081 | 177,712,521 |
nssv2996274 | Remapped | Perfect | NC_000003.12:g.(?_ 177555081)_(177712 521_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 177,555,081 | 177,712,521 |
nssv2996275 | Remapped | Perfect | NC_000003.12:g.(?_ 177555081)_(177712 521_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 177,555,081 | 177,712,521 |
nssv2996490 | Remapped | Perfect | NC_000003.12:g.(?_ 177555081)_(177712 521_?)del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 177,555,081 | 177,712,521 |
nssv2995928 | Submitted genomic | NC_000003.11:g.(?_ 177272869)_(177430 309_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 177,272,869 | 177,430,309 | ||
nssv2995956 | Submitted genomic | NC_000003.11:g.(?_ 177272869)_(177430 309_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 177,272,869 | 177,430,309 | ||
nssv2996044 | Submitted genomic | NC_000003.11:g.(?_ 177272869)_(177430 309_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 177,272,869 | 177,430,309 | ||
nssv2996093 | Submitted genomic | NC_000003.11:g.(?_ 177272869)_(177430 309_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 177,272,869 | 177,430,309 | ||
nssv2996142 | Submitted genomic | NC_000003.11:g.(?_ 177272869)_(177430 309_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 177,272,869 | 177,430,309 | ||
nssv2996235 | Submitted genomic | NC_000003.11:g.(?_ 177272869)_(177430 309_?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 177,272,869 | 177,430,309 | ||
nssv2996274 | Submitted genomic | NC_000003.11:g.(?_ 177272869)_(177430 309_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 177,272,869 | 177,430,309 | ||
nssv2996275 | Submitted genomic | NC_000003.11:g.(?_ 177272869)_(177430 309_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 177,272,869 | 177,430,309 | ||
nssv2996490 | Submitted genomic | NC_000003.11:g.(?_ 177272869)_(177430 309_?)del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 177,272,869 | 177,430,309 |