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dbVar

Database of genomic structural variation

nsv4835607

Organism: Homo sapiens

Study:nstd200 (Abel et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,505

Publication(s):Abel et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 135 SVs from 32 studies. See in: genome view

Remapped(Score: Perfect):117,309,962-117,312,526

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4835607	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	117,309,992 (-30, +51)	117,312,496 (-36, +30)
nsv4835607	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	117,180,708 (-30, +51)	117,183,212 (-36, +30)

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16340676	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16340676	Remapped	Perfect	NC_000011.10:g.(11 7309962_117310043) _(117312460_117312 526)del	GRCh38.p12	First Pass	NC_000011.10	Chr11	117,309,992 (-30, +51)	117,312,496 (-36, +30)
nssv16340676	Submitted genomic		NC_000011.9:g.(117 180678_117180759)_ (117183176_1171832 42)del	GRCh37 (hg19)		NC_000011.9	Chr11	117,180,708 (-30, +51)	117,183,212 (-36, +30)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16340676	<0.001	4	16834

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