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dbVar

Database of genomic structural variation

nsv4851114

Organism: Homo sapiens

Study:nstd200 (Abel et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:453

Publication(s):Abel et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 217 SVs from 32 studies. See in: genome view

Remapped(Score: Perfect):89,962,438-89,962,892

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4851114	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	89,962,439 (-1, +3)	89,962,891 (-3, +1)
nsv4851114	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	90,028,847 (-1, +3)	90,029,299 (-3, +1)

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16367383	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16367383	Remapped	Perfect	NC_000016.10:g.(89 962438_89962442)_( 89962888_89962892) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	89,962,439 (-1, +3)	89,962,891 (-3, +1)
nssv16367383	Submitted genomic		NC_000016.9:g.(900 28846_90028850)_(9 0029296_90029300)d el	GRCh37 (hg19)		NC_000016.9	Chr16	90,028,847 (-1, +3)	90,029,299 (-3, +1)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16367383	<0.001	1	16834

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