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dbVar

Database of genomic structural variation

nsv4873274

Organism: Homo sapiens

Study:nstd200 (Abel et al. 2020)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:10,471,908

Publication(s):Abel et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 24480 SVs from 127 studies. See in: genome view

Remapped(Score: Good):137,979,992-148,451,901

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4873274	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	137,979,993 (-1, +1)	148,451,900 (-1, +1)
nsv4873274	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	137,698,835 (-1, +1)	148,169,687 (-1, +1)

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16411261	inversion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16411261	Remapped	Good	NC_000003.12:g.(13 7979992_137979994) _(148451899_148451 901)inv	GRCh38.p12	First Pass	NC_000003.12	Chr3	137,979,993 (-1, +1)	148,451,900 (-1, +1)
nssv16411261	Submitted genomic		NC_000003.11:g.(13 7698834_137698836) _(148169686_148169 688)inv	GRCh37 (hg19)		NC_000003.11	Chr3	137,698,835 (-1, +1)	148,169,687 (-1, +1)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16411261	<0.001	1	16834

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