nsv4877880
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:181,681
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 639 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 639 SVs from 58 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4877880 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 60,554,641 (-2) | 60,736,321 (-7) |
| nsv4877880 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 60,588,545 (-2) | 60,770,225 (-7) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16410819 | inversion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16410819 | Remapped | Perfect | NC_000016.10:g.(60 554639_?)_(6073631 4_?)inv | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 60,554,641 (-2) | 60,736,321 (-7) |
| nssv16410819 | Submitted genomic | NC_000016.9:g.(605 88543_?)_(60770218 _?)inv | GRCh37 (hg19) | NC_000016.9 | Chr16 | 60,588,545 (-2) | 60,770,225 (-7) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16410819 | <0.001 | 1 | 16834 |