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dbVar

Database of genomic structural variation

nsv4899397

Organism: Homo sapiens

Study:nstd200 (Abel et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,899

Publication(s):Abel et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 201 SVs from 29 studies. See in: genome view

Submitted genomic235,337,794-235,339,693

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4899397	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	235,337,794	235,339,692 (-1, +1)
nsv4899397	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	235,501,109	235,503,007 (-1, +1)

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16424856	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16424856	Submitted genomic		NC_000001.11:g.235 337794_(235339691_ 235339693)del	GRCh38 (hg38)		NC_000001.11	Chr1	235,337,794	235,339,692 (-1, +1)
nssv16424856	Remapped	Perfect	NC_000001.10:g.235 501109_(235503006_ 235503008)del	GRCh37.p13	First Pass	NC_000001.10	Chr1	235,501,109	235,503,007 (-1, +1)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16424856	<0.001	2	29246

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