nsv49
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:17,857
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 771 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 771 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 15 SVs from 8 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv49 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 137,316,337 | 137,334,193 |
nsv49 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 140,210,789 | 140,228,645 |
nsv49 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000009.9 | Chr9 | 137,486,626 | 137,504,482 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv49 | insertion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv49 | Remapped | Perfect | NC_000009.12:g.(13 7316337_?)_(?_1373 34193)ins10595 | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 137,316,337 | 137,334,193 |
nssv49 | Remapped | Perfect | NC_000009.11:g.(14 0210789_?)_(?_1402 28645)ins10595 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,210,789 | 140,228,645 |
nssv49 | Submitted genomic | NC_000009.9:g.(137 486626_?)_(?_13750 4482)ins10595 | NCBI35 (hg17) | NC_000009.9 | Chr9 | 137,486,626 | 137,504,482 |