nsv4909218
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:542,182
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1541 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 1532 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 404 SVs from 29 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4909218 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000023.11 | ChrX | 144,218,751 | 144,760,932 | ||
| nsv4909218 | Remapped | Good | GRCh37.p13 | Primary Assembly | Second Pass | NC_000023.10 | ChrX | 143,301,857 | 143,842,453 |
| nsv4909218 | Remapped | Pass | GRCh37.p13 | PATCHES | First Pass | NW_004070890.2 | ChrX|NW_00 4070890.2 | 1 | 285,326 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16595922 | duplication | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16595922 | Submitted genomic | NC_000023.11:g.144 218751_144760932du p | GRCh38 (hg38) | NC_000023.11 | ChrX | 144,218,751 | 144,760,932 | ||
| nssv16595922 | Remapped | Pass | NW_004070890.2:g.1 _285326dup | GRCh37.p13 | First Pass | NW_004070890.2 | ChrX|NW_00 4070890.2 | 1 | 285,326 |
| nssv16595922 | Remapped | Good | NC_000023.10:g.143 301857_143842453du p | GRCh37.p13 | Second Pass | NC_000023.10 | ChrX | 143,301,857 | 143,842,453 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16595922 | <0.001 | 2 | 29246 |