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dbVar

Database of genomic structural variation

nsv4913798

Organism: Homo sapiens

Study:nstd200 (Abel et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:9,149

Publication(s):Abel et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 174 SVs from 23 studies. See in: genome view

Submitted genomic197,449,800-197,458,991

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4913798	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	197,449,819 (-19, +19)	197,458,967 (-24, +24)
nsv4913798	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	198,314,543 (-19, +19)	198,323,691 (-24, +24)

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16452452	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16452452	Submitted genomic		NC_000002.12:g.(19 7449800_197449838) _(197458943_197458 991)dup	GRCh38 (hg38)		NC_000002.12	Chr2	197,449,819 (-19, +19)	197,458,967 (-24, +24)
nssv16452452	Remapped	Perfect	NC_000002.11:g.(19 8314524_198314562) _(198323667_198323 715)dup	GRCh37.p13	First Pass	NC_000002.11	Chr2	198,314,543 (-19, +19)	198,323,691 (-24, +24)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16452452	<0.001	4	29246

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