nsv498694
- Organism: Homo sapiens
- Study:nstd47 (Kidd et al. 2010b)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:22,695
- Publication(s):Kidd et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 227 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 229 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 86 SVs from 14 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv498694 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 176,621,492 | 176,644,186 |
nsv498694 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 176,590,628 | 176,613,322 |
nsv498694 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000001.9 | Chr1 | 174,857,251 | 174,879,945 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv585408 | copy number loss | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv585408 | Remapped | Perfect | NC_000001.11:g.176 621492_176644186de l | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 176,621,492 | 176,644,186 |
nssv585408 | Remapped | Perfect | NC_000001.10:g.176 590628_176613322de l | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 176,590,628 | 176,613,322 |
nssv585408 | Submitted genomic | NC_000001.9:g.1748 57251_174879945del | NCBI36 (hg18) | NC_000001.9 | Chr1 | 174,857,251 | 174,879,945 |