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dbVar

Database of genomic structural variation

nsv498698

Organism: Homo sapiens

Study:nstd47 (Kidd et al. 2010b)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:78,853

Publication(s):Kidd et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 621 SVs from 76 studies. See in: genome view

Remapped(Score: Perfect):189,735,377-189,814,229

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv498698	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	189,735,377	189,814,229
nsv498698	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	189,704,507	189,783,359
nsv498698	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000001.9	Chr1	187,971,130	188,049,982

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv585412	copy number loss	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv585412	Remapped	Perfect	NC_000001.11:g.189 735377_189814229de l	GRCh38.p12	First Pass	NC_000001.11	Chr1	189,735,377	189,814,229
nssv585412	Remapped	Perfect	NC_000001.10:g.189 704507_189783359de l	GRCh37.p13	First Pass	NC_000001.10	Chr1	189,704,507	189,783,359
nssv585412	Submitted genomic		NC_000001.9:g.1879 71130_188049982del	NCBI36 (hg18)		NC_000001.9	Chr1	187,971,130	188,049,982

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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