nsv498728
- Organism: Homo sapiens
- Study:nstd47 (Kidd et al. 2010b)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:72,026
- Publication(s):Kidd et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 479 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 479 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 127 SVs from 24 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv498728 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 55,459,755 | 55,531,780 |
nsv498728 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 57,219,515 | 57,291,540 |
nsv498728 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 56,889,521 | 56,961,546 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv585445 | copy number loss | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv585445 | Remapped | Perfect | NC_000010.11:g.554 59755_55531780del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 55,459,755 | 55,531,780 |
nssv585445 | Remapped | Perfect | NC_000010.10:g.572 19515_57291540del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 57,219,515 | 57,291,540 |
nssv585445 | Submitted genomic | NC_000010.9:g.5688 9521_56961546del | NCBI36 (hg18) | NC_000010.9 | Chr10 | 56,889,521 | 56,961,546 |