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dbVar

Database of genomic structural variation

nsv498959

Organism: Homo sapiens

Study:nstd47 (Kidd et al. 2010b)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:33,621

Publication(s):Kidd et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1029 SVs from 83 studies. See in: genome view

Remapped(Score: Perfect):1,575,109-1,608,729

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv498959	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	1,575,109	1,608,729
nsv498959	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000020.10	Chr20	1,555,755	1,589,375
nsv498959	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000020.9	Chr20	1,503,755	1,537,375

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv585820	copy number loss	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv585820	Remapped	Perfect	NC_000020.11:g.157 5109_1608729del	GRCh38.p12	First Pass	NC_000020.11	Chr20	1,575,109	1,608,729
nssv585820	Remapped	Perfect	NC_000020.10:g.155 5755_1589375del	GRCh37.p13	First Pass	NC_000020.10	Chr20	1,555,755	1,589,375
nssv585820	Submitted genomic		NC_000020.9:g.1503 755_1537375del	NCBI36 (hg18)		NC_000020.9	Chr20	1,503,755	1,537,375

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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