nsv499592
- Organism: Homo sapiens
- Study:nstd47 (Kidd et al. 2010b)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:14,663
- Publication(s):Kidd et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 469 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 469 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 43 SVs from 17 studies. See in: genome view
Overlapping variant regions from other studies: 241 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv499592 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 150,402,747 | 150,417,409 |
| nsv499592 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 149,571,016 | 149,585,683 |
| nsv499592 | Remapped | Pass | GRCh37.p13 | PATCHES | Second Pass | NW_004070890.2 | ChrX|NW_00 4070890.2 | 5,927,484 | 5,941,406 |
| nsv499592 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 149,321,674 | 149,336,341 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv585593 | inversion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv585593 | Remapped | Good | NC_000023.11:g.150 402747_150417409in v | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 150,402,747 | 150,417,409 |
| nssv585593 | Remapped | Pass | NW_004070890.2:g.5 927484_5941406inv | GRCh37.p13 | Second Pass | NW_004070890.2 | ChrX|NW_00 4070890.2 | 5,927,484 | 5,941,406 |
| nssv585593 | Remapped | Perfect | NC_000023.10:g.149 571016_149585683in v | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 149,571,016 | 149,585,683 |
| nssv585593 | Submitted genomic | NC_000023.9:g.1493 21674_149336341inv | NCBI36 (hg18) | NC_000023.9 | ChrX | 149,321,674 | 149,336,341 |